tag:www.diark.org,2005:/diark/feed
diArk
public/diark_favicon.gif
2024-03-19T09:25:38Z
tag:www.diark.org,2005:GenomeFile/14292
Metschnikowia bicuspidata Baker2002
2018-10-15T15:15:46+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Metschnikowia_bicuspidata_Baker2002" border="1" title="Metschnikowia bicuspidata Baker2002"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Metschnikowia bicuspidata Baker2002 v1 supercontigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (100);
Contigs (478);
GC-Content (51.14%);
Bases (10Mbp);
Filesize (10.66MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Metschnikowia bicaspidata</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Metschnikowiaceae, Metschnikowia</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14290
Komagataella phaffii
2018-10-15T15:16:35+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Komagataella_phaffii" border="1" title="Komagataella phaffii"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Komagataella phaffii v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (-);
Contigs (33);
GC-Content (41.06%);
Bases (9Mbp);
Filesize (9.05MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td></td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Phaffomycetaceae, Komagataella</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14289
Kluyveromyces marxianus LHW-O
2018-10-15T15:16:35+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Kluyveromyces_marxianus_LHW-O" border="1" title="Kluyveromyces marxianus LHW-O"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Kluyveromyces marxianus LHW O v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (812);
Contigs (479);
GC-Content (40.15%);
Bases (10Mbp);
Filesize (10.47MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Zygosaccharomyces marxianus, Zygorenospora marxiana, Zygofabospora marxiana, Saccharomyces marxianus, Kluyveromyces fragilis, Kluyveromyces cicerisporus, Guilliermondella marxiana, Dekkeromyces marxianus, Candida pseudotropicalis</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Saccharomycetaceae, Kluyveromyces</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14288
Wickerhamiella galacta NRRL Y-17645
2018-04-20T08:47:45+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Wickerhamiella_galacta_NRRL_Y-17645" border="1" title="Wickerhamiella galacta NRRL Y-17645"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Wickerhamiella galacta NRRL Y 17645 v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (27.27);
Contigs (2137);
GC-Content (51.81%);
Bases (9Mbp);
Filesize (9.58MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Candida apis var. galacta, Candida galacta</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Trichomonascaceae, Wickerhamiella</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14287
Zygosaccharomyces kombuchaensis CBS 8849
2018-04-08T20:48:47+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Zygosaccharomyces_kombuchaensis_CBS_8849" border="1" title="Zygosaccharomyces kombuchaensis CBS 8849"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Zygosaccharomyces kombuchaensis CBS 8849 v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (23);
Contigs (480);
GC-Content (44.32%);
Bases (9Mbp);
Filesize (9.73MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td></td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Saccharomycetaceae, Zygosaccharomyces</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14286
Hanseniaspora sp. NB-2018a CRUB 1928
2018-04-09T10:34:11+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Hanseniaspora_sp__NB-2018a_CRUB_1928" border="1" title="Hanseniaspora sp. NB-2018a CRUB 1928"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Hanseniaspora sp NB 2018a CRUB 1928 v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (29.3);
Contigs (338);
GC-Content (37.09%);
Bases (10Mbp);
Filesize (9.88MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td></td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Saccharomycodaceae, Hanseniaspora</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14285
Saccharomycodes ludwigii UTAD17
2018-10-12T11:57:17+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Saccharomycodes_ludwigii_UTAD17" border="1" title="Saccharomycodes ludwigii UTAD17"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Saccharomycodes ludwigii UTAD17 v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (-);
Contigs (1360);
GC-Content (31.21%);
Bases (10Mbp);
Filesize (10.6MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Saccharomycodes ludwigii var. ludwigii</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Saccharomycodaceae, Saccharomycodes</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14284
Yarrowia lipolytica NCIM 3590
2018-10-12T11:55:25+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Yarrowia_lipolytica_NCIM_3590" border="1" title="Yarrowia lipolytica NCIM 3590"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Yarrowia lipolytica NCIM 3590 v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (600);
Contigs (485);
GC-Content (47.12%);
Bases (19Mbp);
Filesize (19.4MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Mycotorula lipolytica, Endomycopsis lipolytica</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Dipodascaceae, Yarrowia</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14283
Yarrowia lipolytica NCIM 3589
2018-10-12T11:55:25+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Yarrowia_lipolytica_NCIM_3589" border="1" title="Yarrowia lipolytica NCIM 3589"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Yarrowia lipolytica NCIM 3589 v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (140);
Contigs (375);
GC-Content (49.0%);
Bases (20Mbp);
Filesize (19.83MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Mycotorula lipolytica, Endomycopsis lipolytica</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Dipodascaceae, Yarrowia</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14282
Galactomyces geotrichum 3C
2018-08-28T15:03:14+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Galactomyces_geotrichum_3C" border="1" title="Galactomyces geotrichum 3C"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Galactomyces geotrichum 3C v2 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (95.44);
Contigs (233);
GC-Content (47.13%);
Bases (41Mbp);
Filesize (39.7MB);
Version (2.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Geotrichum candidus, Dipodascus geotrichum, Galactomyces candidum, Oospora lactis, Endomyces geotrichum</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Dipodascaceae, Geotrichum</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14281
Yarrowia porcina
2018-08-27T12:27:28+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Yarrowia_porcina" border="1" title="Yarrowia porcina"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Yarrowia porcina v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (-);
Contigs (43);
GC-Content (44.31%);
Bases (30Mbp);
Filesize (29.44MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Yarrowia sp. NCAIM Y.02073, Yarrowia sp. NCAIM Y.02100, Yarrowia sp. NCAIM Y.02101, Yarrowia sp. NCAIM Y.02102, Yarrowia sp. NCAIM Y.02103, Yarrowia sp. NCAIM Y.02104, Yarrowia sp. UFMG-RD131</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Dipodascaceae, Yarrowia</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14280
Candida osloensis
2018-08-27T09:58:42+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Candida_osloensis" border="1" title="Candida osloensis"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Candida osloensis v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (-);
Contigs (37);
GC-Content (50.89%);
Bases (23Mbp);
Filesize (22.49MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Candida sp. CBS 10145, Candida oslonensis, Candida sp. CBS 10146</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Dipodascaceae, Yarrowia</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14279
Yarrowia galli
2018-08-27T12:27:27+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Yarrowia_galli" border="1" title="Yarrowia galli"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Yarrowia galli v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (-);
Contigs (6);
GC-Content (49.26%);
Bases (22Mbp);
Filesize (22.08MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Yarrowia sp. CN-2014b, Candida galli</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Dipodascaceae, Yarrowia</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14278
Yarrowia keelungensis
2018-08-27T12:27:28+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Yarrowia_keelungensis" border="1" title="Yarrowia keelungensis"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Yarrowia keelungensis v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (-);
Contigs (39);
GC-Content (48.22%);
Bases (21Mbp);
Filesize (20.94MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td></td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Dipodascaceae, Yarrowia</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14277
Yarrowia deformans
2018-08-27T12:27:27+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Yarrowia_deformans" border="1" title="Yarrowia deformans"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Yarrowia deformans v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (-);
Contigs (42);
GC-Content (50.23%);
Bases (20Mbp);
Filesize (20.43MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td></td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Dipodascaceae, Yarrowia</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14276
Yarrowia divulgata
2018-08-27T12:27:27+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Yarrowia_divulgata" border="1" title="Yarrowia divulgata"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Yarrowia divulgata v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (-);
Contigs (19);
GC-Content (50.25%);
Bases (21Mbp);
Filesize (20.55MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>fungal yeast sp. F6-17</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Dipodascaceae, Yarrowia</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14275
Yarrowia bubula
2018-08-27T12:27:26+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Yarrowia_bubula" border="1" title="Yarrowia bubula"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Yarrowia bubula v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (-);
Contigs (28);
GC-Content (46.8%);
Bases (20Mbp);
Filesize (20.22MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Candida sp. NCAIM Y.01998, Yarrowia sp. NCAIM Y.01998</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Dipodascaceae, Yarrowia</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14274
Candida hollandica
2018-08-27T09:58:42+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Candida_hollandica" border="1" title="Candida hollandica"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Candida hollandica v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (-);
Contigs (18);
GC-Content (48.0%);
Bases (19Mbp);
Filesize (19.41MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Candida sp. CBS 4855</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Dipodascaceae, Yarrowia</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14273
Yarrowia alimentaria
2018-08-27T12:27:26+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Yarrowia_alimentaria" border="1" title="Yarrowia alimentaria"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Yarrowia alimentaria v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (-);
Contigs (11);
GC-Content (49.35%);
Bases (19Mbp);
Filesize (19.18MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Candida alimentaria, Yarrowia sp. CN-2014a, Candida sp. CBS 10149, Candida sp. CBS 10151</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Dipodascaceae, Yarrowia</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:GenomeFile/14272
Yarrowia yakushimensis
2018-08-27T12:27:28+00:00
The diArk Team
<table><tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Yarrowia_yakushimensis" border="1" title="Yarrowia yakushimensis"/></td>
<td valign="top"><table>
<tr><td><b>Project name:</b></td><td>NCBI Fungi Genomes Project by National Center for Biotechnology Information</td></tr>
<tr><td><b>Genomefile:</b></td><td>Yarrowia yakushimensis v1 contigs
<img alt="Dna_compl" src="/images/icons/dna_compl.png?1361881497" title="Complete" /></td></tr>
<tr><td><b>Genomeinfos:</b></td><td>
Coverage (-);
Contigs (7);
GC-Content (48.32%);
Bases (18Mbp);
Filesize (18.22MB);
Version (1.0.0);
</td></tr>
<tr><td><b>Alternative name:</b></td><td>Candida yakushimensis, Candida sp. CBS 10252, Candida sp. CBS 10254</td></tr>
<tr><td><b>Other names:</b></td><td></td></tr>
<tr><td><b>Taxonomy:</b></td><td>cellular organisms, Eukaryota, Opisthokonta, Fungi, Dikarya, Ascomycota, saccharomyceta, Saccharomycotina, Saccharomycetes, Saccharomycetales, Dipodascaceae, Yarrowia</td></tr>
</table></td>
</tr></table>
tag:www.diark.org,2005:ProjectPublication/2460
Diutina catenulata WY3-10-4
2018-06-27
O'Brien CE, McCarthy CGP, Walshe AE, Shaw DR, Sumski DA, Krassowski T, Fitzpatrick DA, Butler G
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Diutina_catenulata_WY3-10-4" border="1" title="Diutina catenulata WY3-10-4"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29944657">Genome analysis of the yeast Diutina catenulata, a member of the Debaryomycetaceae/Metschnikowiaceae (CTG-Ser) clade.</a><br />
<i>PLoS One</i> <b>13</b>, e0198957.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2459
Pichia kudriavzevii SJP-SNU
2018-05-19
Hong SM, Kwon HJ, Park SJ, Seong WJ, Kim I, Kim JH
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Pichia_kudriavzevii_SJP-SNU" border="1" title="Pichia kudriavzevii SJP-SNU"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29774473">Genomic and probiotic characterization of SJP-SNU strain of Pichia kudriavzevii.</a><br />
<i>AMB Express</i> <b>8</b>, 80.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2457
Peterozyma xylosa NRRL Y-12939, Nakazawaea wickerhamii NRRL Y-2563, Saturnispora dispora NRRL Y-1447, Candida boidinii NRRL Y-2332, Saccharomycopsis capsularis NRRL Y-17639, Ambrosiozyma philentoma NRRL Y-7523, Citeromyces matritensis NRRL Y-2407
2018-05-16
Krassowski T, Coughlan AY, Shen XX, Zhou X, Kominek J, Opulente DA, Riley R, Grigoriev IV, Maheshwari N, Shields DC, Kurtzman CP, Hittinger CT, Rokas A, Wolfe KH
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Peterozyma_xylosa_NRRL_Y-12939" border="1" title="Peterozyma xylosa NRRL Y-12939"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29760453">Evolutionary instability of CUG-Leu in the genetic code of budding yeasts.</a><br />
<i>Nat Commun</i> <b>9</b>, 1887.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2451
Metschnikowia fructicola AP47, Metschnikowia fructicola 277
2018-04-19
Piombo E, Sela N, Wisniewski M, Hoffmann M, Gullino ML, Allard MW, Levin E, Spadaro D, Droby S
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Metschnikowia_fructicola_AP47" border="1" title="Metschnikowia fructicola AP47"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29666611">Genome Sequence, Assembly and Characterization of Two Metschnikowia fructicola Strains Used as Biocontrol Agents of Postharvest Diseases.</a><br />
<i>Front Microbiol</i> <b>9</b>, 593.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2463
Wickerhamiella galacta NRRL Y-17645, Zygosaccharomyces kombuchaensis CBS 8849
2018-04-13
Goncalves C, Wisecaver JH, Kominek J, Oom MS, Leandro MJ, Shen XX, Opulente DA, Zhou X, Peris D, Kurtzman CP, Hittinger CT, Rokas A, Goncalves P
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Wickerhamiella_galacta_NRRL_Y-17645" border="1" title="Wickerhamiella galacta NRRL Y-17645"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29648535">Evidence for loss and reacquisition of alcoholic fermentation in a fructophilic yeast lineage.</a><br />
<i>Elife</i> <b>7</b>, .
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2428
Uroleptopsis citrina UcQD2011
2018-04-03
Zheng W, Wang C, Yan Y, Gao F, Doak TG, Song W
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Uroleptopsis_citrina_UcQD2011" border="1" title="Uroleptopsis citrina UcQD2011"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29608728">Insights into an Extensively Fragmented Eukaryotic Genome: De Novo Genome Sequencing of the Multinuclear Ciliate Uroleptopsis citrina.</a><br />
<i>Genome Biol Evol</i> <b>10</b>, 883-894.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2427
Heterobasidion parviporum 96026
2018-03-28
Zeng Z, Sun H, Vainio EJ, Raffaello T, Kovalchuk A, Morin E, Duplessis S, Asiegbu FO
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Heterobasidion_parviporum_96026" border="1" title="Heterobasidion parviporum 96026"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29580224">Intraspecific comparative genomics of isolates of the Norway spruce pathogen (Heterobasidion parviporum) and identification of its potential virulence factors.</a><br />
<i>BMC Genomics</i> <b>19</b>, 220.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2432
Mus caroli, Mus pahari
2018-03-23
Thybert D, Roller M, Navarro FCP, Fiddes I, Streeter I, Feig C, Martin-Galvez D, Kolmogorov M, Janousek V, Akanni W, Aken B, Aldridge S, Chakrapani V, Chow W, Clarke L, Cummins C, Doran A, Dunn M, Goodstadt L, Howe K, Howell M, Josselin AA, Karn RC, Laukaitis CM, Jingtao L, Martin F, Muffato M, Nachtweide S, Quail MA, Sisu C, Stanke M, Stefflova K, Van Oosterhout C, Veyrunes F, Ward B, Yang F, Yazdanifar G, Zadissa A, Adams DJ, Brazma A, Gerstein M, Paten B, Pham S, Keane TM, Odom DT, Flicek P
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Mus_caroli" border="1" title="Mus caroli"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29563166">Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes.</a><br />
<i>Genome Res</i> <b>28</b>, 448-459.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2425
Fusarium beomiforme NRRL 25174, Fusarium algeriense NRRL 66648, Fusarium algeriense NRRL 66647, Fusarium burgessii NRRL 66654
2018-03-13
Laraba I, Keddad A, Boureghda H, Abdallah N, Vaughan MM, Proctor RH, Busman M, O'Donnell K
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Fusarium_beomiforme_NRRL_25174" border="1" title="Fusarium beomiforme NRRL 25174"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29528269">Fusarium algeriense, sp. nov., a novel toxigenic crown rot pathogen of durum wheat from Algeria is nested in the Fusarium burgessii species complex.</a><br />
<i>Mycologia</i> <b>109</b>, 935-950.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2436
Epichloe bromicola E7626
2018-03-13
Shi C, An S, Yao Z, Young CA, Panaccione DG, Lee ST, Schardl CL, Li C
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Epichloe_bromicola_E7626" border="1" title="Epichloe bromicola E7626"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29528270">Toxin-producing Epichloe bromicola strains symbiotic with the forage grass Elymus dahuricus in China.</a><br />
<i>Mycologia</i> <b>109</b>, 847-859.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2453
Hyaena hyaena
2018-03-13
Westbury MV, Hartmann S, Barlow A, Wiesel I, Leo V, Welch R, Parker DM, Sicks F, Ludwig A, Dalen L, Hofreiter M
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Hyaena_hyaena" border="1" title="Hyaena hyaena"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29528428">Extended and Continuous Decline in Effective Population Size Results in Low Genomic Diversity in the World's Rarest Hyena Species, the Brown Hyena.</a><br />
<i>Mol Biol Evol</i> <b>35</b>, 1225-1237.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2438
Aspergillus arachidicola CBS 117610
2018-03-11
Moore GG, Mack BM, Beltz SB, Puel O
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Aspergillus_arachidicola_CBS_117610" border="1" title="Aspergillus arachidicola CBS 117610"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29523080">Genome sequence of an aflatoxigenic pathogen of Argentinian peanut, Aspergillus arachidicola.</a><br />
<i>BMC Genomics</i> <b>19</b>, 189.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2437
Labrus bergylta
2018-03-08
Lie KK, Torresen OK, Solbakken MH, Ronnestad I, Tooming-Klunderud A, Nederbragt AJ, Jentoft S, Saele O
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Labrus_bergylta" border="1" title="Labrus bergylta"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29510660">Loss of stomach, loss of appetite? Sequencing of the ballan wrasse (Labrus bergylta) genome and intestinal transcriptomic profiling illuminate the evolution of loss of stomach function in fish.</a><br />
<i>BMC Genomics</i> <b>19</b>, 186.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2421
Magnaporthe oryzae WBKY11, Magnaporthe oryzae WHTQ, Magnaporthe grisea VO107
2018-03-01
Gladieux P, Condon B, Ravel S, Soanes D, Maciel JLN, Nhani A Jr, Chen L, Terauchi R, Lebrun MH, Tharreau D, Mitchell T, Pedley KF, Valent B, Talbot NJ, Farman M, Fournier E
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Magnaporthe_oryzae_WBKY11" border="1" title="Magnaporthe oryzae WBKY11"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29487238">Gene Flow between Divergent Cereal- and Grass-Specific Lineages of the Rice Blast Fungus Magnaporthe oryzae.</a><br />
<i>MBio</i> <b>9</b>, e01219-17.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2431
Desmodus rotundus
2018-02-21
Zepeda Mendoza ML, Xiong Z, Escalera-Zamudio M, Runge AK, Theze J, Streicker D, Frank HK, Loza-Rubio E, Liu S, Ryder OA, Samaniego Castruita JA, Katzourakis A, Pacheco G, Taboada B, Lober U, Pybus OG, Li Y, Rojas-Anaya E, Bohmann K, Carmona Baez A, Arias CF, Liu S, Greenwood AD, Bertelsen MF, White NE, Bunce M, Zhang G, Sicheritz-Ponten T, Gilbert MPT
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Desmodus_rotundus" border="1" title="Desmodus rotundus"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29459707">Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat.</a><br />
<i>Nat Ecol Evol</i> <b>2</b>, 659-668.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2433
Santalum album cultivar GKVK-1
2018-02-15
Mahesh HB, Subba P, Advani J, Shirke MD, Loganathan RM, Chandana SL, Shilpa S, Chatterjee O, Pinto SM, Prasad TSK, Gowda M
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Santalum_album_cultivar_GKVK-1" border="1" title="Santalum album cultivar GKVK-1"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29440596">Multi-Omics Driven Assembly and Annotation of the Sandalwood (Santalum album) Genome.</a><br />
<i>Plant Physiol</i> <b>176</b>, 2772-2788.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2429
Blattella germanica, Cryptotermes secundus
2018-02-07
Harrison MC, Jongepier E, Robertson HM, Arning N, Bitard-Feildel T, Chao H, Childers CP, Dinh H, Doddapaneni H, Dugan S, Gowin J, Greiner C, Han Y, Hu H, Hughes DST, Huylmans AK, Kemena C, Kremer LPM, Lee SL, Lopez-Ezquerra A, Mallet L, Monroy-Kuhn JM, Moser A, Murali SC, Muzny DM, Otani S, Piulachs MD, Poelchau M, Qu J, Schaub F, Wada-Katsumata A, Worley KC, Xie Q, Ylla G, Poulsen M, Gibbs RA, Schal C, Richards S, Belles X, Korb J, Bornberg-Bauer E
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Blattella_germanica" border="1" title="Blattella germanica"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29403074">Hemimetabolous genomes reveal molecular basis of termite eusociality.</a><br />
<i>Nat Ecol Evol</i> <b>2</b>, 557-566.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2426
Planoprotostelium fungivorum
2018-01-30
Hillmann F, Forbes G, Novohradska S, Ferling I, Riege K, Groth M, Westermann M, Marz M, Spaller T, Winckler T, Schaap P, Glockner G
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Planoprotostelium_fungivorum" border="1" title="Planoprotostelium fungivorum"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29378020">Multiple Roots of Fruiting Body Formation in Amoebozoa.</a><br />
<i>Genome Biol Evol</i> <b>10</b>, 591-606.
</td>
</tr>
</table>
tag:www.diark.org,2005:ProjectPublication/2435
Trichoplusia ni
2018-01-30
Fu Y, Yang Y, Zhang H, Farley G, Wang J, Quarles KA, Weng Z, Zamore PD
<table>
<tr>
<td><img src="http://img.motorprotein.de/img/species_pict/Trichoplusia_ni" border="1" title="Trichoplusia ni"/></td>
<td valign="top">
<a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=29376823">The genome of the Hi5 germ cell line from Trichoplusia ni, an agricultural pest and novel model for small RNA biology.</a><br />
<i>Elife</i> <b>7</b>, .
</td>
</tr>
</table>
tag:www.diark.org,2005:Yaml2feed/1
2011-09-28T00:00:00Z
The diArk Team
NEWS! New diArk publication (2011-09-28)
<table><tr><td valign="top"><img alt="Diark_link" border="1" src="/images/layout/diark_link.png?1361881497" title="diArk" /></td><td valign="top"><p>
We proudly present the new <a href="http://www.biomedcentral.com/1756-0500/4/338" class="external" target="_blank">diArk paper</a>.
It describes the newest features of diArk and the available data. Furthermore, it compares diArk to related databases and explains, why you should use diArk.
</p>
<p>
<a href="http://www.biomedcentral.com/info/about/openaccess" target="_blank">
<img src="/images/icons/openaccess.gif" alt="Open Access" style="float: left; padding-left: 0px"/>
</a>
<a href="http://www.biomedcentral.com/info/about/mostviewed#highlyaccessed" target="_blank">
<img src="/images/icons/highlyaccessed.gif" alt="Highly Accessed" style="float: left; padding-left: 5px"/>
</a>
<div><br /></div>
<div>
<b>B. Hammesfahr, F. Odronitz, M. Hellkamp & M. Kollmar (2011)</b>
<a style="font-style:normal" class="external" href="http://www.biomedcentral.com/1756-0500/4/338" target="_blank">diArk 3.0 provides detailed analyses of the ever increasing eukaryotic genome sequencing data.</a>
<i>BMC Research Notes</i><b> 4</b>, 338.
</div>
</p>
</td></tr></table>
tag:www.diark.org,2005:Yaml2feed/2
2011-03-30T00:00:00Z
The diArk Team
NEWS! New welcome page (2011-03-30)
<table><tr><td valign="top"><img alt="Diark_link" border="1" src="/images/layout/diark_link.png?1361881497" title="diArk" /></td><td valign="top"><p>diArk's welcome page has been revised. Now, the latest species in the database are shown together with information about the genome type, taxonomy, number of contigs, GC-content, size in Mbp, and the corresponding file size. Also a link is provided directing to the corresponding diArk species page for full information. Try it and visit <a href="http://www.diark.org">http://www.diark.org</a>.</p></td></tr></table>
tag:www.diark.org,2005:Yaml2feed/3
2011-03-28T00:00:00Z
The diArk Team
NEWS! New function: Sharing your search (2011-03-28)
<table><tr><td valign="top"><img alt="Diark_link" border="1" src="/images/layout/diark_link.png?1361881497" title="diArk" /></td><td valign="top"><p>Now it is possible to send the result of your search to colleagues and friends. To do that, click the <a href="http://sharethis.com/">ShareThis</a> icon <img src="http://www.diark.org/images/icons/sharethis_small.png" /> , which is available in each result tab.
By clicking this icon, a small popup window will appear where you can select e.g. Email, Facebook, Twitter, or Google Buzz to send your search. Shared searches will be available on the server for three days.</p></td></tr></table>
tag:www.diark.org,2005:Yaml2feed/5
2010-09-07T00:00:00Z
The diArk Team
NEWS! New functions and changes (2010-09-07)
<table><tr><td valign="top"><img alt="Diark_link" border="1" src="/images/layout/diark_link.png?1361881497" title="diArk" /></td><td valign="top"><p>This is a major update to the database scheme, the web-interface, and the database content. In the Projects search module, it is now possible to search for a reference using an autocompletion text field. In the Genome Files search module, different kind of sequencing methods can be searched for. Furthermore, search results can be filtered by different assembly methods and the corresponding software versions.</p>
<p>In the Projects result view, the work of the sequencing centers and the curators of species home pages is now referenced, if the corresponding work has been published. Of course, every work is still referenced by links to the corresponding webpages.</p>
<p>Many changes were made to the Genome_Files result view. Now, you can also download genomes that are not from NCBI if you accept the license for usage as written by the sequencing centers. You can recognize those files by the download icon with a key in it. Furthermore, you can get a graph with all contigs ordered by their length and the resulting N50 value. This information can be used to judge the quality of the dataset. More sequence information was added to the Seq info. The different sequencing methods are colour-coded, and further information like the types of clone-libraries, sequencing coverage, and methods used to create the assembly can be obtained by clicking on the icon.</p>
<p>In the Sequencing_Stats result view many new statistical analyses are available: all species separated by taxa, total sequenced species by taxa/year, complete and incomplete species/year, total available sequenced species/year (number of species and number of data), genomesize/GC-content (separated by taxa), boxplot of the genomesize of taxa, sequencing method/year, number of publications/year, and total assembled data/year for the major sequencing centres (number of genomes and number of bases). And like everything at diArk, these graphs are computed on-the-fly and only for the selection of your search (therefore it might sometimes take some time). And of course, you can download each of the graphs.</p>
<p>Furthermore, an additional way of searching diArk's data was developed, the so-called Fast_Search. Here, you can search diArk using the most common search options. This search would be most suitable for beginners.</p></td></tr></table>
tag:www.diark.org,2005:Yaml2feed/6
2010-09-06T00:00:00Z
The diArk Team
NEWS! New News System (2010-09-06)
<table><tr><td valign="top"><img alt="Diark_link" border="1" src="/images/layout/diark_link.png?1361881497" title="diArk" /></td><td valign="top"><p>A RSS-Feed is now available to obtain the latest news and changes about diark. The feed includes updates on newly sequenced species as well as new assemblies of already sequenced species. New cDNA/EST projects and publications will not be listed. To stay up-to-date we highly recommend to use diArk's RSS-Feed!</p></td></tr></table>