Species

Chlamydomonas reinhardtii

[ Viridiplantae | Chlorophyta | Chlorophyceae | . . .
. . . | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas ]

Chlamydomonas_reinhardtii
Taxonomy:Eukaryota | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas
Comment:Chlamydomonas reinhardtii is a single celled chlorophyte. Highly adaptable, these green algae live in many different environments throughout the world. Normally deriving energy from photosynthesis, with an alternative carbon source, C. reinhardtii can also thrive in total darkness. The DNA used for the genomic sequence was CC-503 cw92 mt+, a cell-wall deficient strain, which was used in order to get high-quality DNA. In addition the BAC library was also prepared from strain CC-503 cw92 mt+. Most of the EST libraries sequenced at Stanford were prepared in the wild-type strain CC-1690 21 gr mt+. Both CC-503 and CC-1690 derive from the same original field isolate, made in Massachusetts in 1945, but they have been separate since at least the mid-1950s. S1 D2, a strain used for some ESTs and comparative sequencing, is a field isolate from Minnesota, dating from the 1980s.
Ncbi Go to NCBI Taxonomy (3055)
Eol Encyclopedia of life
Wiki Wikipedia
Publications:
et. al. Right (2007)
Science 318, 245-250. Down

Genome files


DOE Joint Genome Institute DOE Joint Genome Institute
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Chloroplast v 3.1.0 2006-05-08 Rna_dna_compl 12.8 33.9 0.2 10Info - 220 - Chromosome_license Comment
Mitochondrium v 3.1.0 2006-05-08 Rna_dna_compl 12.8 50.3 0.0 4Info - 8 - Chromosome_license Comment
Supercontigs v 4.0.0 2009-03-04 Rna_dna_compl 12.8 64.1 103.8 88Info - 6617 - Chromosome_license Comment
Supercontigs v 3.1.0 2006-05-08 Rna_dna_compl 12.8 64.0 104.7 1266Info - 1695 - Chromosome_license Comment
Supercontigs v 2.0.0 2003-12-10 - 63.5 91.4 3211Info Yes 504 - Chromosome_license Comment
Supercontigs v 1.0.0 2003-01-15 Rna_dna_part - 63.7 88.6 4065Info - 48 - Chromosome_license Comment

GenBank - NIH genetic sequence database GenBank - NIH genetic sequence database
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Contigs v 1.0.0 2007-07-12 Dna_compl 12.8 63.9 105.2 11384Info - 44 Down Chromosome Comment
Supercontigs v 1.0.0 2007-07-12 Dna_compl 12.8 63.9 105.2 1556Info - 1695 Down Chromosome Comment

Phytozome Phytozome
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Supercontigs v 5.0.0 - Dna_compl - 64.1 107.1 54Info - 7783 - Chromosome_license Comment
Go DOE Joint Genome Institute Supercontigs v 4.0.0

diArk 3.0 Content Info

Species:5699
References:167
Projects:8087
gen DNA Projects:4486
EST/cDNA Projects:849
Publications:2177
link to cymobase
link to scipio
link to www.motorprotein.de
MPI for biophysical chemistry

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