Species

Rattus norvegicus BN/Sprague-Dawley

[ Opisthokonta | Metazoa | Eumetazoa | . . .
. . . | Muridae | Murinae | Rattus ]

Rattus_norvegicus_BN_Sprague_Dawley Picture Source
Taxonomy:Eukaryota | Opisthokonta | Metazoa | Eumetazoa | Bilateria | Deuterostomia | Chordata | Craniata | Vertebrata | Gnathostomata | Teleostomi | Euteleostomi | Sarcopterygii | Dipnotetrapodomorpha | Tetrapoda | Amniota | Mammalia | Theria | Eutheria | Boreoeutheria | Euarchontoglires | Glires | Rodentia | Sciurognathi | Muroidea | Muridae | Murinae | Rattus
Synonym:Rattus rattiscus (misnomer), Gunn rats (misnomer)
Common:brown rat, rat (German: Hausratte, Wanderratte)
Comment:This is the January 2003 combined whole genome shotgun assembly of Rattus norvegicus. It contains 29 million Brown Norway fragments sequenced by Celera and external sources and nearly eight million Celera-proprietary Sprague-Dawley sequence fragments. The assembly process relied on Celera's paired reads and BAC end reads from TIGR for long range order and orientation. Its scaffolds were mapped to chromosomes using STS maps.
Ncbi Go to NCBI Taxonomy (10116)
Eol Encyclopedia of life
Wiki Wikipedia

Genome files


National Center for Biotechnology Information National Center for Biotechnology Information
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Chromosome v 1.0.0 2005-06-08 Dna_compl - 42.0 2442.7 21Info - 138621 Down Chromosome Comment
Contigs v 1.0.0 2005-06-08 Dna_compl - 41.9 2807.7 503452Info - 34 Down Chromosome Comment
Supercontigs v 1.0.0 2005-06-08 Dna_compl - 42.0 2481.9 4102Info - 27430 Down Chromosome Comment

National Center for Biotechnology Information Reference Sequences National Center for Biotechnology Information Reference Sequences
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Chromosome v 1.0.0 2005-09-02 Rna_dna_compl - 42.0 2442.7 21Info - 138621 Down Chromosome Comment
Unplaced chromosome v 1.0.0 2005-09-02 Rna_dna_compl - 40.4 49.8 7020Info - 17 Down Chromosome Comment

diArk 3.0 Content Info

Species:5699
References:167
Projects:8087
gen DNA Projects:4486
EST/cDNA Projects:849
Publications:2177
link to cymobase
link to scipio
link to www.motorprotein.de
MPI for biophysical chemistry

Facebook_grey
Twitter_grey
Googleplus_grey
2 Clicks for more privacy: You have to click the top icon to enable the Facebook Like, the Twitter, or the Google+ button.