Species

Rattus norvegicus BN/SsNHsdMCW

[ Opisthokonta | Metazoa | Eumetazoa | . . .
. . . | Muridae | Murinae | Rattus ]

Rattus_norvegicus_BN_SsNHsdMCW Picture Source
Taxonomy:Eukaryota | Opisthokonta | Metazoa | Eumetazoa | Bilateria | Deuterostomia | Chordata | Craniata | Vertebrata | Gnathostomata | Teleostomi | Euteleostomi | Sarcopterygii | Dipnotetrapodomorpha | Tetrapoda | Amniota | Mammalia | Theria | Eutheria | Boreoeutheria | Euarchontoglires | Glires | Rodentia | Sciurognathi | Muroidea | Muridae | Murinae | Rattus
Synonym:Rattus rattiscus (misnomer), Gunn rats (misnomer)
Common:brown rat, rat (German: Hausratte, Wanderratte)
Ncbi Go to NCBI Taxonomy (10116)
Eol Encyclopedia of life
Wiki Wikipedia
Publications:
et. al. Right (2014)
Nature 508, 488-493. Down
et. al. Right (2011)
Nature 478, 476-482. Down

Genome files


Human Genome Sequencing Center at Baylor College of Medicine Human Genome Sequencing Center at Baylor College of Medicine
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Chromosome v 4.1.2 2010-02-23 Dna_compl 42.0 2471.8 43Info - 139269 - Chromosome_license Comment
Chromosome v 4.1.1 2010-02-23 Dna_compl 42.0 2480.0 43Info - 139070 - Chromosome_license Comment
Chromosome v 4.0.0 2008-02-27 Dna_compl - 41.9 2827.4 22Info Yes 198899 - Chromosome_license Comment
Chromosome v 3.4.0 2004-11-01 Dna_compl - 41.9 2504.5 42Info Yes 143002 - Chromosome_license Comment
Contigs v 4.1.0 2010-02-23 Dna_compl 42.0 2470.9 186926Info - 45 - Chromosome_license Comment
Contigs v 4.0.0 2008-02-27 Dna_compl - 41.8 3044.0 239518Info - 24 - Chromosome_license Comment
Unplaced chromosome v 3.4.0 2004-11-01 Dna_compl - 41.4 61.8 2Info Yes 75822 - Chromosome_license Comment

National Center for Biotechnology Information National Center for Biotechnology Information
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Chromosome v 7.0.0 2014-06-25 Rna_dna_compl 42.0 2651.7 22Info - 147991 Down Chromosome Comment
Chromosome v 6.0.0 2012-03-08 Rna_dna_compl 9 41.9 2568.1 21Info - 154597 Down Chromosome Comment
Chromosome v 4.0.0 2008-10-20 Rna_dna_compl - 42.0 2619.5 21Info Yes 174003 Down Chromosome Comment
Chromosome v 3.0.0 2003-07-11 Rna_dna_compl - 41.9 2477.1 21Info - 147636 Down Chromosome Comment
Contigs v 7.0.0 2014-06-25 Rna_dna_compl 41.9 2580.2 73554Info - 99 Down Chromosome Comment
Contigs v 6.0.0 2012-03-08 Rna_dna_compl 9 41.9 2572.8 112651Info - 59 Down Chromosome Comment
Contigs v 5.0.0 2010-01-26 Rna_dna_compl 7 42.0 2471.8 187024Info Yes 45 Down Chromosome Comment
Contigs v 4.0.0 2008-10-20 Rna_dna_compl - 41.8 3044.0 239518Info - 24 Down Chromosome Comment
Contigs v 3.0.0 2003-07-11 Rna_dna_compl - 41.9 2565.5 137910Info - 36 Down Chromosome Comment
Supercontigs v 7.0.0 2014-06-25 Rna_dna_compl 41.9 2727.7 1102Info - 14986 Down Chromosome Comment
Supercontigs v 6.0.0 2012-03-08 Rna_dna_compl 9 41.9 2569.3 8539Info - 2178 Down Chromosome Comment
TSA assembly 01 v 1.0.0 2014-02-04 Rna_dna_part - 40.8 0.0 12 - Down Chromosome Comment
TSA assembly 02 v 1.0.0 2013-11-06 Rna_dna_part - 46.2 0.0 5 - Down Chromosome Comment
Unplaced chromosome v 4.0.0 2008-10-20 Rna_dna_compl - 41.5 141.0 7670Info - 28 Down Chromosome Comment

National Center for Biotechnology Information Reference Sequences National Center for Biotechnology Information Reference Sequences
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Chromosome v 2.0.0 2005-04-19 Rna_dna_compl - 41.9 2477.1 21Info - 147636 Down Chromosome Comment
Mitochondrium v 2.0.0 2006-07-06 Rna_dna_compl - 38.6 0.0 1Info - 16 Down Chromosome Comment
Unplaced chromosome v 2.0.0 2005-04-19 Rna_dna_compl - 41.8 89.2 449Info - 593 Down Chromosome Comment

UCSC Genome Bioinformatics UCSC Genome Bioinformatics
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Go Human Genome Sequencing Center at Baylor College of Medicine Chromosome v 3.4.0
Go Human Genome Sequencing Center at Baylor College of Medicine Unplaced chromosome v 3.4.0

e! Ensembl e! Ensembl
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Go Human Genome Sequencing Center at Baylor College of Medicine Chromosome v 3.4.0
Go Human Genome Sequencing Center at Baylor College of Medicine Unplaced chromosome v 3.4.0

diArk 3.0 Content Info

Species:5699
References:167
Projects:8087
gen DNA Projects:4486
EST/cDNA Projects:849
Publications:2177
link to cymobase
link to scipio
link to www.motorprotein.de
MPI for biophysical chemistry

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