Species

Takifugu rubripes

[ Opisthokonta | Metazoa | Eumetazoa | . . .
. . . | Tetradontoidea | Tetraodontidae | Takifugu ]

Takifugu_rubripes Picture Source
Taxonomy:Eukaryota | Opisthokonta | Metazoa | Eumetazoa | Bilateria | Deuterostomia | Chordata | Craniata | Vertebrata | Gnathostomata | Teleostomi | Euteleostomi | Actinopterygii | Actinopteri | Neopterygii | Teleostei | Osteoglossocephalai | Clupeocephala | Euteleosteomorpha | Neoteleostei | Eurypterygia | Ctenosquamata | Acanthomorphata | Euacanthomorphacea | Percomorphaceae | Percomorpharia | Tetraodontiformes | Tetraodontoidei | Tetradontoidea | Tetraodontidae | Takifugu
Synonym:Fugu rubripes
Common:torafugu
Comment:The Japanese pufferfish Fugu rubripes has the shortest known genome of any vertebrate species. As vertebrates, fish and humans share not only the defining characteristic of a backbone, but also many basic anatomical and physiological similarities. The compact Fugu genome contains the same basic vertebrate blueprint as the human genome in a sequence seven times shorter. This difference is primarily due to the scarcity in Fugu of the large repeat-filled tracts that litter the human genome.
Ncbi Go to NCBI Taxonomy (31033)
Eol Encyclopedia of life
Wiki Wikipedia
Publications:
et. al. Right (2003)
Genome Res 13, 2747-53. Down
et. al. Right (2002)
Science 297, 1301-10. Down

Genome files


DOE Joint Genome Institute DOE Joint Genome Institute
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Supercontigs v 4.0.0 2004-10-29 Dna_compl 8.5 45.5 351.2 7213Info - 858 - Chromosome_license Comment
Supercontigs v 3.0.0 2002-08-26 Dna_compl 5.7 45.3 315.5 20379Info Yes 124 - Chromosome_license Comment
Supercontigs v 1.0.0 2001-10-26 Dna_part 4.1 45.5 301.8 20825Info Yes 26 - Chromosome_license Comment

National Center for Biotechnology Information National Center for Biotechnology Information
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Chromosome v 2.0.0 2011-07-07 Dna_compl - 45.3 268.9 22Info Yes 13093 Down Chromosome Comment
Contigs v 2.0.0 2011-07-07 Dna_compl - 45.5 350.9 30857Info Yes 52 Down Chromosome Comment
Contigs v 1.0.0 2002-07-01 Dna_compl - 45.5 322.3 12381Info - 67 Down Chromosome Comment
Supercontigs v 2.0.0 2011-07-07 Dna_compl - 45.5 350.9 7090Info Yes 928 Down Chromosome Comment

Singapore Institute of Molecular and Cell Biology Singapore Institute of Molecular and Cell Biology
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Chromosome v 5.0.0 2010-01-01 Dna_compl - 45.5 350.6 45Info Yes 13093 - License Comment
Supercontigs v 4.0.0 2004-10-01 Dna_compl 8.7 45.5 351.2 7213Info Yes 858 - License Comment

UCSC Genome Bioinformatics UCSC Genome Bioinformatics
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Go DOE Joint Genome Institute Supercontigs v 4.0.0
Go DOE Joint Genome Institute Supercontigs v 3.0.0

e! Ensembl e! Ensembl
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Go Singapore Institute of Molecular and Cell Biology Supercontigs v 4.0.0

diArk 3.0 Content Info

Species:2627
References:133
Projects:4125
gen DNA Projects:2042
EST/cDNA Projects:655
Publications:1167
link to cymobase
link to scipio
link to www.motorprotein.de
MPI for biophysical chemistry

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