Species

Takifugu rubripes

[ Opisthokonta | Metazoa | Eumetazoa | . . .
. . . | Tetradontoidea | Tetraodontidae | Takifugu ]

Takifugu_rubripes Picture Source
Taxonomy:Eukaryota | Opisthokonta | Metazoa | Eumetazoa | Bilateria | Deuterostomia | Chordata | Craniata | Vertebrata | Gnathostomata | Teleostomi | Euteleostomi | Actinopterygii | Actinopteri | Neopterygii | Teleostei | Osteoglossocephalai | Clupeocephala | Euteleosteomorpha | Neoteleostei | Eurypterygia | Ctenosquamata | Acanthomorphata | Euacanthomorphacea | Percomorphaceae | Eupercaria | Tetraodontiformes | Tetraodontoidei | Tetradontoidea | Tetraodontidae | Takifugu
Synonym:Fugu rubripes
Common:torafugu
Comment:The Japanese pufferfish Fugu rubripes has the shortest known genome of any vertebrate species. As vertebrates, fish and humans share not only the defining characteristic of a backbone, but also many basic anatomical and physiological similarities. The compact Fugu genome contains the same basic vertebrate blueprint as the human genome in a sequence seven times shorter. This difference is primarily due to the scarcity in Fugu of the large repeat-filled tracts that litter the human genome.
Ncbi Go to NCBI Taxonomy (31033)
Eol Encyclopedia of life
Wiki Wikipedia

Genome files


DOE Joint Genome Institute DOE Joint Genome Institute
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Supercontigs v 4.0.0 2004-10-29 Dna_compl 8.5 45.5 351.2 7213Info - 858 - Chromosome_license Comment
Supercontigs v 3.0.0 2002-08-26 Dna_compl 5.7 45.3 315.5 20379Info Yes 124 - Chromosome_license Comment
Supercontigs v 1.0.0 2001-10-26 Dna_part 4.1 45.5 301.8 20825Info Yes 26 - Chromosome_license Comment

National Center for Biotechnology Information National Center for Biotechnology Information
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Chromosome v 2.0.0 2011-07-07 Dna_compl - 45.3 268.9 22Info Yes 13093 Down Chromosome Comment
Contigs v 2.0.0 2011-07-07 Dna_compl - 45.5 350.9 30857Info Yes 52 Down Chromosome Comment
Contigs v 1.0.0 2002-07-01 Dna_compl - 45.5 322.3 12381Info - 67 Down Chromosome Comment
Supercontigs v 2.0.0 2011-07-07 Dna_compl - 45.5 350.9 7090Info Yes 928 Down Chromosome Comment

Singapore Institute of Molecular and Cell Biology Singapore Institute of Molecular and Cell Biology
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Chromosome v 5.0.0 2010-01-01 Dna_compl - 45.5 350.6 45Info Yes 13093 - License Comment
Supercontigs v 4.0.0 2004-10-01 Dna_compl 8.7 45.5 351.2 7213Info Yes 858 - License Comment

UCSC Genome Bioinformatics UCSC Genome Bioinformatics
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Go DOE Joint Genome Institute Supercontigs v 4.0.0
Go DOE Joint Genome Institute Supercontigs v 3.0.0

e! Ensembl e! Ensembl
Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info
Go Singapore Institute of Molecular and Cell Biology Supercontigs v 4.0.0

diArk 3.0 Content Info

Species:2710
References:135
Projects:4231
gen DNA Projects:2129
EST/cDNA Projects:655
Publications:1205
link to cymobase
link to scipio
link to www.motorprotein.de
MPI for biophysical chemistry

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