Species

Ictalurus punctatus

[ Opisthokonta | Metazoa | Eumetazoa | . . .
. . . | Siluroidei | Ictaluridae | Ictalurus ]

Courtesy of Noel Burkhead

Taxonomy: Eukaryota | Opisthokonta | Metazoa | Eumetazoa | Bilateria | Deuterostomia | Chordata | Craniata | Vertebrata | Gnathostomata | Teleostomi | Euteleostomi | Actinopterygii | Actinopteri | Neopterygii | Teleostei | Osteoglossocephalai | Clupeocephala | Otomorpha | Ostariophysi | Otophysi | Characiphysae | Siluriformes | Siluroidei | Ictaluridae | Ictalurus Common: channel catfish (German: Getüpfelter Gabelwels, Marmorwels) Go to NCBI Taxonomy (7998) Encyclopedia of life Wikipedia Projects: (GIGA)nDB: Supporting data for "High-quality genome assembly of channel catfish, Ictalurus punctatus" GenBank - NIH genetic sequence database: GenBank species TBLASTN International TSA Sequencing Consortium: Ictalurus punctatus TSA Sequencing Consortium National Center for Biotechnology Information: NCBI Eukaryotic Genomes Project The Gene Index Project: DFCI Ictalurus punctatus (Catfish) Gene Index Publications: Zeng Q, Liu S, Yao J et. al. (2016) Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Biol Reprod 95, 19. 10.1095/biolreprod.116.138818 Liu Z, Liu S, Yao J et. al. (2016) The channel catfish genome sequence provides insights into the evolution of scale formation in teleosts. Nat Commun 7, 11757. 10.1038/ncomms11757 Jiang Y, Lu J, Peatman E et. al. (2011) A pilot study for channel catfish whole genome sequencing and de novo assembly. BMC Genomics 12, 629. 10.1186/1471-2164-12-629 Show all 4 Publications Genome files (GIGA)nDB Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info Supercontigs v 1.0.0 2016-07-31 - 39.9 809.8 31979 - 7248 - National Center for Biotechnology Information Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info Chromosome v 1.0.0 2016-05-24 54 39.7 752.2 29 - 28145 Contigs v 1.0.0 2016-05-24 54 39.7 771.9 34543 - 77 Supercontigs v 1.0.0 2016-05-24 54 39.7 761.0 1147 - 7726 TSA assembly 01 v 1.0.0 2014-03-25 - 40.7 0.0 1 - TSA assembly 02 v 1.0.0 2016-03-15 - 44.5 372.3 379844 - TSA assembly 03 v 1.0.0 2016-06-03 - 47.2 38.1 25430 - -