Species

Physcomitrella patens

[ Viridiplantae | Streptophyta | Streptophytina | . . .
. . . | Funariales | Funariaceae | Physcomitrella ]

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Taxonomy: Eukaryota | Viridiplantae | Streptophyta | Streptophytina | Embryophyta | Bryophyta | Bryophytina | Bryopsida | Funariidae | Funariales | Funariaceae | Physcomitrella Comment: The moss Physcomitrella patens is an attractive model system for plant biology and functional genome analysis. Go to NCBI Taxonomy (3218) Encyclopedia of life Wikipedia Projects: DOE Joint Genome Institute: Physcomitrella patens ssp patens ecotype Gransden 2004 e! Ensembl: Physcomitrella patens GenBank - NIH genetic sequence database: GenBank species TBLASTN WGS PHYSCObase: Physcomitrella patens Physcomitrella patens resource: Physcomitrella patens Phytozome: Physcomitrella patens (Moss) Publications: Lang D, Ullrich KK, Murat F et. al. (2018) The Physcomitrella patens chromosome-scale assembly reveals moss genome structure and evolution. Plant J 93, 515-533. 10.1111/tpj.13801 Zimmer AD, Lang D, Buchta K et. al. (2013) Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions. BMC Genomics 14, 498. 10.1186/1471-2164-14-498 Rensing SA, Lang D, Zimmer AD et. al. (2008) The physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science 319, 64-69. 10.1126/science.1150646 Genome files DOE Joint Genome Institute Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info Supercontigs v 1.1.0 2007-03-01 8.1 33.6 453.9 2106 - 1316 - GenBank - NIH genetic sequence database Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info Chromosome v 2.0.0 2018-01-12 18.49 33.7 462.3 27 - - 17435 - Contigs v 2.0.0 2018-01-12 18.49 33.7 465.9 357 - - 17435 - Contigs v 1.0.0 2007-11-15 8.1 33.6 453.9 19135 - 74 Supercontigs v 1.0.0 2007-11-15 8.1 33.6 453.9 2106 - 1316 Phytozome Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info Supercontigs v 3.0.0 2014-01-12 - 33.7 467.1 378 - 17435 - Supercontigs v 1.1.0 e! Ensembl Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info Supercontigs v 1.1.0