Species

Pinus taeda

[ Viridiplantae | Streptophyta | Streptophytina | . . .
. . . | Pinaceae | Pinus | Pinus ]

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Taxonomy: Eukaryota | Viridiplantae | Streptophyta | Streptophytina | Embryophyta | Tracheophyta | Euphyllophyta | Spermatophyta | Acrogymnospermae | Pinidae | Pinales | Pinaceae | Pinus | Pinus Common: loblolly pine (German: Weihrauchkiefer, amerikanische Terpentinkiefer) Go to NCBI Taxonomy (3352) Encyclopedia of life Wikipedia Projects: (GIGA)nDB: Supporting data for "An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing" GenBank - NIH genetic sequence database: GenBank species TBLASTN WGS Pine Reference Sequences: Pine Reference Sequences Publications: Zimin AV, Stevens KA, Crepeau MW et. al. (2017) An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing. Gigascience 6, 1-4. 10.1093/gigascience/giw016 Neale DB, Wegrzyn JL, Stevens KA et. al. (2014) Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies. Genome Biol 15, R59. 10.1186/gb-2014-15-3-r59 Wegrzyn JL, Lin BY, Zieve JJ et. al. (2013) Insights into the Loblolly Pine Genome: Characterization of BAC and Fosmid Sequences. PLoS One 8, e72439. 10.1371/journal.pone.0072439 Genome files (GIGA)nDB Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info Supercontigs v 2.0.0 2016-12-15 - 37.5 20532.2 1762655 - 107 - GenBank - NIH genetic sequence database Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info Contigs v 3.0.0 2016-12-18 37.4 20531.6 1760464 - 107 - Contigs v 1.0.0 2013-03-04 - 38.1 265.5 90954 - 16 Pine Reference Sequences Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info Contigs v 1.0.0 - - 37.8 17811.7 7745182 - 9 - Contigs v 0.6.0 - - 38.2 18321.7 31054295 - 1 - - Supercontigs v 1.0.0 - - 38.2 20223.4 17337630 - 15 - Supercontigs v 0.6.0 - - 38.2 18321.7 30885813 - 1 - -