Species

Rattus norvegicus BN/Sprague-Dawley

[ Opisthokonta | Metazoa | Eumetazoa | . . .
. . . | Muridae | Murinae | Rattus ]

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Taxonomy: Eukaryota | Opisthokonta | Metazoa | Eumetazoa | Bilateria | Deuterostomia | Chordata | Craniata | Vertebrata | Gnathostomata | Teleostomi | Euteleostomi | Sarcopterygii | Dipnotetrapodomorpha | Tetrapoda | Amniota | Mammalia | Theria | Eutheria | Boreoeutheria | Euarchontoglires | Glires | Rodentia | Myomorpha | Muroidea | Muridae | Murinae | Rattus Synonym: Rattus rattiscus (misnomer), Gunn rats (misnomer) Common: brown rat, rat (German: Hausratte, Wanderratte) Comment: This is the January 2003 combined whole genome shotgun assembly of Rattus norvegicus. It contains 29 million Brown Norway fragments sequenced by Celera and external sources and nearly eight million Celera-proprietary Sprague-Dawley sequence fragments. The assembly process relied on Celera's paired reads and BAC end reads from TIGR for long range order and orientation. Its scaffolds were mapped to chromosomes using STS maps. Go to NCBI Taxonomy (10116) Encyclopedia of life Wikipedia Projects: National Center for Biotechnology Information: NCBI Eukaryotic Genomes Project National Center for Biotechnology Information Reference Sequences: Rattus norvegicus (rat) genome view Genome files National Center for Biotechnology Information Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info Chromosome v 1.0.0 2005-06-08 - 42.0 2442.7 21 - 138621 Contigs v 1.0.0 2005-06-08 - 41.9 2807.7 503452 - 34 Supercontigs v 1.0.0 2005-06-08 - 42.0 2481.9 4102 - 27430 National Center for Biotechnology Information Reference Sequences Type Version Date Compl Cov GC % Size (Mbp) Contigs CGR Illegal Chars N50 (kbp) Acc File Seq info Chromosome v 1.0.0 2005-09-02 - 42.0 2442.7 21 - 138621 Unplaced chromosome v 1.0.0 2005-09-02 - 40.4 49.8 7020 - 17